uniqueSeqs {LymphoSeq} | R Documentation |
Aggregates all productive sequences within a list of data frames by count.
uniqueSeqs(productive.aa)
productive.aa |
A list data frames of of productive amino acid sequences imported using the function LymphoSeq function productiveSeq where the aggregate parameter was set to "aminoAcid". |
A data frame of unique amino acid sequences from the list of data frames aggregated by count.
file.path <- system.file("extdata", "TCRB_sequencing", package = "LymphoSeq") file.list <- readImmunoSeq(path = file.path) productive.aa <- productiveSeq(file.list = file.list, aggregate = "aminoAcid") unique.seqs <- uniqueSeqs(productive.aa = productive.aa)