enrich_posfrac_score {LRcell} | R Documentation |
This function takes a specific gene expression, cell type annotation and a hyperparameter to calculate enrichment scores.
enrich_posfrac_score(gene, expr, annot, power = 1)
gene |
Gene name from the expression matrix. |
expr |
Complete expression matrix with rows as genes and columns as cells. |
annot |
Cell type annotation named vector with names as cell ids and values as cell types. |
power |
The penalty on fraction of cells expressing the genes |
Enrichment score list with cell type as names and enrichment score as values.