list_manager {InterMineR}R Documentation

A Class for Managing List Content and Operations

Description

This class may be called itself, and all the useful methods it has are available through the list objects themselves.

Usage

list_manager(Service-class)

Arguments

Service-class

a Service-class object containing the base URL and API token.

Details

The public gene lists for each Mine are available at the websites obtained by the following command: paste0(listMines()["Mine_Name"], "/bag.do?subtab=view")

Get a new ListManager to use with this service. This class provides methods to manage list contents and operations.

Value

list_manager function returns an object containing the following values:

DEFAULT_LIST_NAME

"my_list"

DEFAULT_DESCRIPTION

"List created with R client library"

URL endpoints

LIST_PATH, INTERSECTION_PATH, UNION_PATH, DIFFERENCE_PATH, SUBTRACTION_PATH

mine

the base URL

token

the API token

Author(s)

InterMine Team

See Also

ListManager-methods, ListManager-class

Examples

#hashed out example as requires API key
#im.human.list <- list_manager(initInterMine(listMines()["HumanMine"],"TOKEN")) #Add your API Token key
#class(im.human.list)
#resp <- get_list(im.human.list, " PL_Pax6_Targets")
#resp

[Package InterMineR version 1.16.0 Index]