getPipelines {IMPCdata} | R Documentation |
Returns the list of IMPC pipelines (IMPReSS IDs) that are run by specified phenotyping center.
getPipelines(PhenCenterName=NULL,excludeLegacyPipelines=TRUE)
PhenCenterName |
IMPC phenotyping center; mandatory argument |
excludeLegacyPipelines |
flag: "FALSE" value to get all pipelines including legacy pipelines; "TRUE" value (default) to get current IMPC pipelines excluding legacy pipelines |
Returns the list of IMPC pipelines (IDS of pipelines) that are run by specified phenotyping center.
Natalja Kurbatova, Jeremy Mason
listPipelines <- getPipelines("WTSI") for (pipelineIndex in 1:length(listPipelines)) { print(paste(listPipelines[pipelineIndex],"-", getName("pipeline_stable_id","pipeline_name",listPipelines[pipelineIndex]))) }