optim_llik_RE_p {GWAS.BAYES} | R Documentation |
This will calculate the p-value and perform the optimization in the full kinship model case
optim_llik_RE_p(x,y,d)
x |
Reduced design matrix with principal components, intercept and SNP of interest |
y |
The reduced matrix of the response value of interest |
d |
The spectral decomposition diagonal matrix of eigen values |
Returns a p-value for the specified data