getPrecursorsQuery {DIAlignR}R Documentation

Get precursor Info

Description

For each precursor in the table respective transition ids are fetched. Order of transition is kept same as the order of their intensities in getTransitionsQuery.

Usage

getPrecursorsQuery(runType = "DIA_Proteomics", level = "Peptide")

Arguments

runType

(string) This must be one of the strings "DIA_Proteomics", "DIA_IPF", "DIA_Metabolomics".

level

(string) Apply maxPeptideFDR on Protein as well if specified as "Protein". Default: "Peptide".

Value

SQL query to be searched.

Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2020-04-04

See Also

fetchPrecursorsInfo


[Package DIAlignR version 2.2.0 Index]