runMclust {CytoTree}R Documentation

runMclust

Description

Model-based clustering based on parameterized finite Gaussian mixture models. This function is based on Mclust.

Usage

runMclust(object, scale = FALSE, verbose = FALSE, ...)

Arguments

object

an CYT object

scale

logical. Whether to use scaled data in Mclust.

verbose

logical. Whether to print calculation progress.

...

Parameters passing to Mclust function

Value

an CYT object with mclust.id in meta.data

See Also

Mclust

Examples


cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree")
cyt <- readRDS(file = cyt.file)

cyt <- runMclust(cyt, verbose = TRUE)



[Package CytoTree version 1.4.0 Index]