plotMarkerDensity {CytoTree}R Documentation

plotMarkerDensity

Description

plotMarkerDensity

Usage

plotMarkerDensity(
  object,
  cutoff = -1,
  markers = NULL,
  adjust = 0.5,
  plot.theme = theme_bw()
)

Arguments

object

An CYT object

cutoff

numeric. Cutoff of trajectory value

markers

character. Markers used in the calculation progress

adjust

numeric. Transparency (0-1) of the dot, default is 1.

plot.theme

themes from ggplot2

Value

ggplot2 figure

Examples


if (FALSE) {

plotMarkerDensity(cyt)
plotMarkerDensity(cyt, adjust = 1)

}


[Package CytoTree version 1.4.0 Index]