selectOps {CrispRVariants} | R Documentation |
select CIGAR operations in a region of interest.
selectOps(cigar, ...) ## S4 method for signature 'character' selectOps(cigar, ..., ops = GenomicAlignments::CIGAR_OPS, op.regions = NULL, pos = 1L)
cigar |
CIGAR strings |
... |
Extra arguments (Not currently used) |
ops |
CIGAR operations to consider (Default: all) |
op.regions |
(GRanges) Return operations only in these regions |
pos |
An offset for the cigar ranges |
A GRanges list of opertion locations in reference space with a metadata column for the operation width in query space.
Helen Lindsay