setMismatchTileColours {CrispRVariants}R Documentation

Sets colours for plotting mismatches in aligned DNA sequences.

Description

Sets tile colours for plotAlignments with a DNA alphabet.

Usage

setMismatchTileColours(m)

Arguments

m

A data frame of nucleotides and plotting locations, e.g. created by transformAlnsToLong

Value

A matrix with additional columns specifying tile and text colours

Author(s)

Helen Lindsay


[Package CrispRVariants version 1.22.0 Index]