preprocess_CPM {ChromSCape}R Documentation

Preprocess scExp - Counts Per Million (CPM)

Description

Preprocess scExp - Counts Per Million (CPM)

Usage

preprocess_CPM(scExp)

Arguments

scExp

A SingleCellExperiment Object

Value

A SingleCellExperiment object.

Examples

raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
scExp = preprocess_CPM(scExp)
head(SingleCellExperiment::normcounts(scExp))


[Package ChromSCape version 1.4.0 Index]