reduce_dim_batch_correction {ChromSCape}R Documentation

Reduce dimension with batch corrections

Description

Reduce dimension with batch corrections

Usage

reduce_dim_batch_correction(scExp, mat, batch_list, n)

Arguments

scExp

SingleCellExperiment

mat

The normalized count matrix

batch_list

List of batches

n

Number of PCs to keep

Value

A list containing the SingleCellExperiment with batch info and the corrected pca


[Package ChromSCape version 1.4.0 Index]