preprocess_RPKM {ChromSCape}R Documentation

Preprocess scExp - Read per Kilobase Per Million (RPKM)

Description

Preprocess scExp - Read per Kilobase Per Million (RPKM)

Usage

preprocess_RPKM(scExp)

Arguments

scExp

A SingleCellExperiment Object

Value

A SingleCellExperiment object.

Examples


raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
scExp = preprocess_RPKM(scExp)
head(SingleCellExperiment::normcounts(scExp))

[Package ChromSCape version 1.4.0 Index]