concatenate_scBed_into_clusters {ChromSCape} | R Documentation |
Concatenate single-cell BED into clusters
concatenate_scBed_into_clusters(affectation, files_list, odir)
affectation |
Annotation data.frame containing cluster information |
files_list |
Named list of scBED file paths to concatenate. List Names must match affectation$sample_id and basenames must match affectation$barcode. |
odir |
Output directory to write concatenate pseudo-bulk BEDs. |
Merge single-cell BED files into cluster BED files. Ungzip file if BED is gzipped.