modifySettings {Chicago} | R Documentation |
Modify the settings in a chicagoData
object.
modifySettings(cd, designDir=NULL, settings=list(), settingsFile=NULL)
cd |
A |
designDir |
The new location of the design directory, e.g "~/resources/path" or NULL if not modified. |
settings |
A named list containing settings to modify. |
settingsFile |
The location of a file containing settings or NULL if not provided. Each row should contain the name of a setting, followed by whitespace, followed by the value of that setting. |
cd
's settings are updated. For a list of available settings, see defaultSettings
.
An object of class chicagoData
.
Mikhail Spivakov, Jonathan Cairns, Paula Freire Pritchett
setExperiment
, defaultSettings
designDir <- file.path(system.file("extdata", package="Chicago"), "unitTestDesign") cd <- setExperiment(designDir) ##Suppose I want to change the number of samples drawn for dispersion estimation print(settings(cd)$brownianNoise.subset) cd <- modifySettings(cd, settings=list(brownianNoise.subset = 10)) print(settings(cd)$brownianNoise.subset)