ribl-methods {ChIPQC} | R Documentation |
Retrieve the numbers of reads overlapping blacklisted regions.
signature(object = "ChIPQCexperiment")
Retrieve a vector
of the numbers of reads overlapping blacklisted regions for each sample in an experiment.
signature(object = "list")
Retrieve a vector
of the numbers of reads overlapping blacklisted regions for each sample in a list of ChIPQCsample objects.
signature(object = "ChIPQCsample")
Retrieve the number of reads overlapping blacklisted regions in a sample.
Thomas Carroll and Rory Stark
ChIPQC-package, ChIPQCexperiment, ChIPQCsample
data(example_QCexperiment) ribl(exampleExp) ribl(QCsample(exampleExp,1))