.generate_ordination {CellTrails}R Documentation

AUX: Orthogonal projection ordination

Description

Generates 2D ordination from orthogonal projection

Usage

.generate_ordination(g, error, factor = 7, rev = FALSE, only.ordi = FALSE)

Arguments

g

Graph from orthogonal projection, igraph object

error

Error from orthogonal projection; numeric vector

only.ordi

Compute only ordination?

Value

A list containing the following components:

ordi

Ordination

ordi.jitter

Jittered ordination

backbone

Backbone of trajectory

Author(s)

Daniel C. Ellwanger


[Package CellTrails version 1.12.0 Index]