CellBarcode {CellBarcode}R Documentation

DNA Barcode Analysis toolkit

Description

This package performs DNA Barcode (genetic lineage tracing) analysis. The package can handle all kinds of DNA barcodes, as long as the barcode within a single sequencing read and has a pattern which can be matched by a regular expression. CellBarcode can handle barcode with flexible length, with or without UMI (unique molecular identifier). This tool also can be used for pre-processing of some amplicon data such as CRISPR gRNA screening, immune repertoire sequencing and meta genome data.


[Package CellBarcode version 1.0.0 Index]