fetchChromSizes {CNEr} | R Documentation |
This function tries to automate the fetch of chromosome sizes for assemblies from UCSC.
fetchChromSizes(assembly)
assembly |
A |
This function downloads ‘chromInfo.txt.gz’ from UCSC golden path for UCSC assemblies.
A object of Seqinfo
is returned.
Currently, the assemblies from UCSC are supported.
Ge Tan
fetchChromSizes("hg19") fetchChromSizes("mm10")