CTSScumulativesTagClusters {CAGEr} | R Documentation |
Accessor function.
CTSScumulativesTagClusters(object, samples = NULL) ## S4 method for signature 'CAGEexp' CTSScumulativesTagClusters(object, samples = NULL) CTSScumulativesCC(object, samples = NULL) ## S4 method for signature 'CAGEexp' CTSScumulativesCC(object, samples = NULL) CTSScumulativesTagClusters(object) <- value ## S4 replacement method for signature 'CAGEexp' CTSScumulativesTagClusters(object) <- value
object |
A |
samples |
One or more valid sample names. |
value |
CTSScumulativesTagClusters data |
List of numeric Rle.
Other CAGEr clusters functions:
CTSSclusteringMethod()
,
CustomConsensusClusters()
,
aggregateTagClusters()
,
clusterCTSS()
,
consensusClustersDESeq2()
,
consensusClustersGR()
,
cumulativeCTSSdistribution()
,
plotInterquantileWidth()
,
quantilePositions()
,
tagClustersGR()
Other CAGEr accessor methods:
CTSSclusteringMethod()
,
CTSScoordinatesGR()
,
CTSSnormalizedTpmDF()
,
CTSStagCountDF()
,
GeneExpDESeq2()
,
GeneExpSE()
,
consensusClustersGR()
,
expressionClasses()
,
genomeName()
,
inputFilesType()
,
inputFiles()
,
librarySizes()
,
sampleLabels()
,
seqNameTotalsSE()
,
tagClustersGR()