parse_orthofinder {BioNERO} | R Documentation |
This function converts the orthogroups file named Orthogroups.tsv to a 3-column data frame that can be interpreted by BioNERO.
parse_orthofinder(file_path = NULL)
file_path |
Path to Orthogroups/Orthogroups.tsv file generated by OrthoFinder. |
A 3-column data frame with orthogroups, species IDs and gene IDs, respectively.
Fabricio Almeida-Silva
path <- system.file("extdata", "Orthogroups.tsv", package = "BioNERO") og <- parse_orthofinder(path)