dropout_coefficient_values {BUSseq} | R Documentation |
BUSseq_MCMC
Function
The function gives the intercept and odds ratio of the logistic regression
for dropout events in the output SingleCellExperiment
object.
dropout_coefficient_values(sce_BUSseqfit)
sce_BUSseqfit |
An output |
gamma.est |
The estimated intercept and log ratio of the logistic regression for dropout events, a 2-diminsional vector. |
Fangda Song
Song, Fangda, Ga Ming Angus Chan, and Yingying Wei. Flexible experimental designs for valid single-cell RNA-sequencing experiments allowing batch effects correction. Nature communications 11, no. 1 (2020): 1-15.
# "BUSseqfits_example" is an example output BUSseqfits_example gamma.est <- dropout_coefficient_values(BUSseqfits_example)