as.data.frame,BASiCS_ResultsDE-method {BASiCS} | R Documentation |
Converting BASiCS results objects to data.frames
## S4 method for signature 'BASiCS_ResultsDE' as.data.frame(x, Parameter, Filter = TRUE, ProbThreshold = NULL) ## S4 method for signature 'BASiCS_ResultDE' as.data.frame(x, Filter = TRUE, ProbThreshold = NULL) ## S4 method for signature 'BASiCS_ResultVG' as.data.frame(x, Filter = TRUE, ProbThreshold = NULL)
x |
An object of class BASiCS_ResultVG, BASiCS_ResultDE, or BASiCS_ResultsDE. |
Parameter |
For BASiCS_ResultsDE objects only. Character scalar specifying which table of results to output. Available options are "Mean", (mu, mean expression), "Disp" (delta, overdispersion) and "ResDisp" (epsilon, residual overdispersion). |
Filter |
Logical scalar. If |
ProbThreshold |
Only used if |
A data.frame of test results.