MUVR_model_plot {AlpsNMR} | R Documentation |
Plot the model (a MUVR
object) obtained from rdCV_PLS_RF
function. For
more information about the multivariate modelling with minimally biased
variable selection (MUVR) from the MUVR
package, see Shi et al., 2018 (DOI:
10.1093/bioinformatics/bty710).
MUVR_model_plot(MVObj, model = "mid", factCols, sampLabels, ylim = NULL)
MVObj |
a MUVR model |
model |
What type of model to plot ('min', 'mid' or 'max'). Defaults to 'mid'. |
factCols |
An optional vector with colors for the factor levels (in the same order as the levels). |
sampLabels |
Sample labels (optional; implemented for classification) |
ylim |
Optional for imposing y-limits for regression and classification analysis |
A plot with the model performance
message("MUVR is not compatible with Bioconductor, use bp_kfold_VIP_analysis method instead")