exprMatrix {AffiXcan} | R Documentation |
Toy dataset used in examples to describe affiXcanTrain() function.
data(exprMatrix)
An object of class SummarizedExperiment
.
The data consist in a SummarizedExperiment object that contains a matrix of expression values (RPKM) of two randomly chosen genes ("ENSG00000139269.2" and "ENSG00000256377.1") for 229 individuals of european descent. The data was retrieved subsetting the RNA-sequencing data of EBV-transformed lymphocytes from the GEUVADIS public dataset (see 'source')
https://www.ebi.ac.uk/arrayexpress/files/E-GEUV-3/
library(SummarizedExperiment) data(exprMatrix) toyExpressionMatrix <- assays(exprMatrix)$values