Bioconductor version: Release (3.13)
This Data package contains data objcets relevanat for the SingleMoleculeFootprinting package. More specifically, it contains one example of aligned sequencing data (.bam & .bai) necessary to run the SingleMoleculeFootprinting vignette. Additionally, we provide data that are essential for some functions to work correctly such as BaitCapture() and SampleCorrelation().
Author: Guido Barzaghi [aut, cre] , Arnaud Krebs [aut] , Mike Smith [ctb]
Maintainer: Guido Barzaghi <guido.barzaghi at embl.de>
Citation (from within R,
enter citation("SingleMoleculeFootprintingData")
):
To install this package, start R (version "4.1") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("SingleMoleculeFootprintingData")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SingleMoleculeFootprintingData")
HTML | R Script | SingleMoleculeFootprintingData |
Reference Manual | ||
Text | LICENSE |
biocViews | ExperimentData, ExperimentHub, SequencingData |
Version | 1.0.0 |
License | GPL-3 |
Depends | |
Imports | ExperimentHub, utils |
LinkingTo | |
Suggests | knitr, rmarkdown |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | SingleMoleculeFootprinting |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | SingleMoleculeFootprintingData_1.0.0.tar.gz |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/SingleMoleculeFootprintingData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SingleMoleculeFootprintingData |
Package Short Url | https://bioconductor.org/packages/SingleMoleculeFootprintingData/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: