tscR

DOI: 10.18129/B9.bioc.tscR    

A time series clustering package combining slope and Frechet distances

Bioconductor version: Release (3.13)

Clustering for time series data using slope distance and/or shape distance.

Author: Miriam Riquelme-Pérez and Fernando Pérez-Sanz

Maintainer: Pérez-Sanz, Fernando <fernando.perez8 at um.es>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tscR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tscR")

 

HTML	R Script	tscR
PDF		Reference Manual
Text		NEWS

Details

biocViews	Clustering, DNAMethylation, GeneExpression, Microarray, Software
Version	1.4.0
In Bioconductor since	BioC 3.11 (R-4.0) (1.5 years)
License	GPL (>=2)
Depends	R (>= 4.0), dplyr
Imports	gridExtra, methods, dtw, class, kmlShape, graphics, cluster, RColorBrewer, grDevices, knitr, rmarkdown, prettydoc, grid, ggplot2, latex2exp, stats, SummarizedExperiment, GenomicRanges, IRanges, S4Vectors
LinkingTo
Suggests	testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	tscR_1.4.0.tar.gz
Windows Binary	tscR_1.4.0.zip (32- & 64-bit)
macOS 10.13 (High Sierra)	tscR_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/tscR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/tscR
Package Short Url	https://bioconductor.org/packages/tscR/
Package Downloads Report	Download Stats