This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see rnaSeqMap.
Bioconductor version: Release (3.13)
The rnaSeqMap library provides classes and functions to analyze the RNA-sequencing data using the coverage profiles in multiple samples at a time
Author: Anna Lesniewska <alesniewska at cs.put.poznan.pl>; Michal Okoniewski <michal at fgcz.ethz.ch>
Maintainer: Michal Okoniewski <michal at fgcz.ethz.ch>
Citation (from within R,
enter citation("rnaSeqMap")
):
To install this package, start R (version "4.1") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("rnaSeqMap")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | Annotation, DifferentialExpression, GeneExpression, ImmunoOncology, RNASeq, ReportWriting, SAGE, Sequencing, Software, Transcription, Visualization |
Version | 2.50.0 |
In Bioconductor since | BioC 2.7 (R-2.12) (11 years) |
License | GPL-2 |
Depends | R (>= 2.11.0), methods, Biobase, Rsamtools, GenomicAlignments |
Imports | GenomicRanges, IRanges, edgeR, DESeq, DBI |
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Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/rnaSeqMap |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rnaSeqMap |
Package Short Url | https://bioconductor.org/packages/rnaSeqMap/ |
Package Downloads Report | Download Stats |
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