Bioconductor version: Release (3.13)
This package provides a model for the clone size distribution of the TCR repertoire. Further, it permits comparative analysis of TCR repertoire libraries based on theoretical model fits.
Author: Hillary Koch
Maintainer: Hillary Koch <hillary.koch01 at gmail.com>
Citation (from within R,
enter citation("powerTCR")
):
To install this package, start R (version "4.1") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("powerTCR")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("powerTCR")
HTML | R Script | Vignette Title |
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
biocViews | BiomedicalInformatics, Clustering, Software |
Version | 1.12.0 |
In Bioconductor since | BioC 3.7 (R-3.5) (3.5 years) |
License | Artistic-2.0 |
Depends | |
Imports | cubature, doParallel, evmix, foreach, magrittr, methods, parallel, purrr, stats, truncdist, vegan, VGAM |
LinkingTo | |
Suggests | BiocStyle, knitr, rmarkdown, RUnit, BiocGenerics |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | scRepertoire |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | powerTCR_1.12.0.tar.gz |
Windows Binary | powerTCR_1.12.0.zip |
macOS 10.13 (High Sierra) | powerTCR_1.12.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/powerTCR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/powerTCR |
Package Short Url | https://bioconductor.org/packages/powerTCR/ |
Package Downloads Report | Download Stats |
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