scaterCPM {singleCellTK} | R Documentation |
scaterCPM Uses CPM from scater library to compute counts-per-million.
scaterCPM(inSCE, assayName = "ScaterCPMCounts", useAssay = "counts")
inSCE |
Input SingleCellExperiment object |
assayName |
New assay name for cpm data. |
useAssay |
Input assay |
inSCE Updated SingleCellExperiment object
Irzam Sarfraz
data(sce_chcl, package = "scds") sce_chcl <- scaterCPM(sce_chcl,"countsCPM", "counts")