term_similarity {simplifyEnrichment}R Documentation

Similarity between terms based on the overlap of genes

Description

Similarity between terms based on the overlap of genes

Usage

term_similarity(gl, method = c("kappa", "jaccard", "dice", "overlap"))

Arguments

gl

A list of genes that are in the terms.

method

The similarity measurement.

Details

The definition of the four similarity measurements can be found at https://simplifyenrichment.github.io/supplementary/suppl1_coefficient_definition/suppl1_coefficient_definition.html .

Value

A symmetric matrix.

Examples

# There is no example
NULL


[Package simplifyEnrichment version 1.2.0 Index]