set_readable {signatureSearch} | R Documentation |
Mapping 'itemID' column in the FEA enrichment result table from Entrez ID to gene Symbol
set_readable( tb, OrgDb = "org.Hs.eg.db", keyType = "ENTREZID", geneCol = "itemID" )
tb |
tibble object, enrichment result table |
OrgDb |
character(1), 'org.Hs.eg.db' for human |
keyType |
character(1), keyType of gene |
geneCol |
character(1), name of the column in 'tb' containing gene Entrez ids separated by '/' to be converted to gene Symbol |
tibble Object
data(drugs10) res <- tsea_dup_hyperG(drugs=drugs10, type="Reactome", pvalueCutoff=1, qvalueCutoff=1) res_tb <- set_readable(result(res))