result {signatureSearch} | R Documentation |
Method extracts tibbles
from result
slots of feaResult
and gessResult
objects. They are generated by the GESS and FEA
functions defined by signatureSearch
, respectively.
result(x) ## S4 method for signature 'feaResult' result(x) ## S4 method for signature 'gessResult' result(x)
x |
|
tibble
fr <- feaResult(result=dplyr::tibble(id=letters[seq_len(10)], val=seq_len(10)), organism="human", ontology="MF", drugs=c("d1", "d2"), targets=c("t1","t2")) result(fr) gr <- gessResult(result=dplyr::tibble(pert=letters[seq_len(10)], val=seq_len(10)), query=list(up=c("g1","g2"), down=c("g3","g4")), gess_method="LINCS", refdb="path/to/lincs/db") result(gr)