sesamePlotIntensVsBetas {sesame} | R Documentation |
Plot Total Signal Intensities vs Beta Values This plot is helpful in revealing the extent of signal background and dye bias.
sesamePlotIntensVsBetas(sset, mask = TRUE, intens.range = c(5, 15))
sset |
a |
mask |
whether to remove probes that are masked |
intens.range |
plot range of signal intensity |
create a total signal intensity vs beta value plot
sesameDataCache("EPIC") sset <- # if not done yet sset <- sesameDataGet('EPIC.1.LNCaP')$sset sesamePlotIntensVsBetas(sset)