define_kernel_matrix {scAlign} | R Documentation |
Adds the defined kernel to the operation graph for high dimensional pairwise data similarity
define_kernel_matrix( method, data = NULL, labels = NULL, data_shape, perplexity = NULL, diag = "zero" )
method |
Kernel to compute pairwise cell similarity |
data |
cell x feature data matrix |
labels |
cell x 1 annotation (label) vector |
data_shape |
number of features for data |
perplexity |
neighborhood parameter for gaussian kernel |
diag |
indicator for self similarity |
Tensorflow op