scatterCompareAssays {pulsedSilac} | R Documentation |
Scatter plot of two conditions/replicates for a selected assay.
Timepoints are separated using facet_wrap
.
scatterCompareAssays(x, ...) ## S4 method for signature 'SilacProteinExperiment' scatterCompareAssays( x, conditions, assayName, returnDataFrame = FALSE, conditionCol, timeCol ) ## S4 method for signature 'SilacPeptideExperiment' scatterCompareAssays( x, conditions, assayName, returnDataFrame = FALSE, conditionCol, timeCol ) ## S4 method for signature 'SilacProteomicsExperiment' scatterCompareAssays( x, conditions, assayName, mode = "protein", returnDataFrame = FALSE, conditionCol, timeCol )
x |
A |
... |
Unused. |
conditions |
A |
assayName |
Name of the assay to use in the plot. |
returnDataFrame |
A |
conditionCol |
A |
timeCol |
A |
mode |
A |
A ggplot
object or the data.frame
that would be used
instead in the plot.
data('wormsPE') scatterCompareAssays(x = wormsPE, conditions = c('OW40', 'OW450'), assayName = 'ratio', mode = 'protein')