getBaseProfile {oligo} | R Documentation |
Computes and, optionally, lots nucleotide profile, describing the sequence effect on intensities.
getBaseProfile(coefs, probeLength = 25, plot = FALSE, ...)
coefs |
affinity spline coefficients. |
probeLength |
length of probes |
plot |
logical. Plots profile? |
... |
arguments to be passed to matplot. |
Invisibly returns a matrix with estimated effects.