buildrunBNBedFiles {nanotatoR}R Documentation

Reads BED files to produce bionano Bed files

Description

Reads BED files to produce bionano Bed files

Usage

buildrunBNBedFiles(bedFile, returnMethod = c("Text", "dataFrame"),
  outdir)

Arguments

bedFile

character. Path to UCSC Bed File.

returnMethod

character. Path to output directory.

outdir

character. Path to output directory.

Value

Data Frame or text file. Contains the gene information.

Examples

bedFile <- system.file("extdata", "Homo_sapiens.Hg19.bed", 
package="nanotatoR")
bed<-buildrunBNBedFiles(bedFile,returnMethod="dataFrame")

[Package nanotatoR version 1.8.0 Index]