dmr,matrix-method {mina} | R Documentation |
Dimensionality reduction of the distance matrix.
## S4 method for signature 'matrix' dmr(x, k = 4)
x |
A distance matrix. |
k |
The number of dimensionality after reduction, 4 by default. |
y The coordinates of components indicated in distance matrix in k dimension.
maize <- new("mina", tab = maize_asv2, des = maize_des2) maize <- norm_tab(maize, method = "raref") maize <- fit_tabs(maize) maize <- com_dis(maize, method = "bray") asv_dis <- dis(maize) asv_dis_dmr <- dmr(asv_dis, k = 4)