get_gxg {martini}R Documentation

Get gene interactions

Description

Wrapper for the different functions to get gene-gene interactions. Supports cached results.

Usage

get_gxg(db, organism, flush)

Arguments

db

String containing the database to obtain the gene-gene interactions from. Possible values: 'biogrid', 'string'.

organism

Tax ID of the studied organism. The default is 9606 (human).

flush

Remove cached results? Boolean value.

Value

A data.frame with two columns with pairs of interacting proteins.


[Package martini version 1.12.0 Index]