Heatmap {heatmaps}R Documentation

Function to create a heatmap object

Description

Function to create a heatmap object

Usage

Heatmap(image, coords = NULL, label = "", nseq = NULL, scale = NULL,
  metadata = list())

Arguments

image

A numeric Matrix

coords

A length-2 integer vector

label

A character vector

nseq

An integer

scale

A length-2 vector

metadata

A list containing arbitrary metadata

Using this function avoids calling 'new' directly or manually setting coords and nseq to integers. Other constructors exist for creating heatmaps from data, rather than a raw matrix.

Value

A Heatmap object

See Also

PatternHeatmap CoverageHeatmap PWMScanHeatmap

Examples


data(HeatmapExamples)
hm = Heatmap(mat, coords=c(-100, 100), label="Test")

[Package heatmaps version 1.16.0 Index]