loadGeneCounts {getDEE2}R Documentation

Load Gene Counts

Description

This function loads STAR gene level counts from a downloaded zip file.

Usage

loadGeneCounts(zipname)

Arguments

zipname

Path to the zipfile.

Value

a dataframe of gene expression counts.

Examples

x <- getDEE2("ecoli",c("SRR1613487","SRR1613488"),outfile="mydata.zip")
y <- loadGeneCounts("mydata.zip")

[Package getDEE2 version 1.2.0 Index]