ms_psig {flowGraph} | R Documentation |
Determines which phenotypes are statistically significant based on SpecEnr.
ms_psig( ms_, summary_pars, summary_adjust, test_cust, test_custom, lyrno, mp_, me_ )
ms_ |
sample x phenotype SpecEnr matrix |
summary_pars |
See |
summary_adjust |
See |
test_cust |
Final significance test function. |
test_custom |
Raw significance test function. |
lyrno |
An integer indicating total number of layers in the cell hierarchy including layer 0. |
mp_ |
sample x phenotype proportion matrix. |
me_ |
sample x phenotype expected proportion matrix. |
A logical vector the same length as the number of columns in
ms_
indicating whether or not each phenotype is significant;
used only for the fast version of flowGraph to determine whether or not
to keep testing the phenotypes' children.