computeQuantileMatrix {divergence} | R Documentation |
Function for computing the quantile transformation for one or more samples supplied as columns of a matrix.
computeQuantileMatrix(seMat)
seMat |
A data matrix in SummarizedExperiment form, with each column corresponding to a sample and each row corresponding to a feature. |
A matrix of the same dimensions with the quantile data.
baseMat = breastTCGA_Mat[, breastTCGA_Group == "NORMAL"] seMat.base = SummarizedExperiment(assays=list(data=baseMat)) assays(seMat.base)$quantile = computeQuantileMatrix(seMat.base)