getPCAexplained {debrowser} | R Documentation |
Creates a more detailed plot using the PCA results from the selected dataset.
getPCAexplained(datasetInput = NULL, pca_data = NULL, input = NULL)
datasetInput, |
selected data |
pca_data, |
from user |
input, |
input params |
explained plot
load(system.file("extdata", "demo", "demodata.Rda", package="debrowser")) input<-c() input$qcplot<-"pca" input$col_list<-colnames(demodata[,1:6]) dat <- getNormalizedMatrix(demodata[,1:6]) pca_data <- run_pca(dat) x <- getPCAexplained(dat, pca_data, input)