seqdat {clstutils} | R Documentation |
Provides annotation for link{seqs}
, an aligned 16S
rRNA sequences representing three Enterococcus species.
data(seqdat)
A data frame with 200 observations on the following 5 variables.
seqname
a character vector
accession
a character vector containing GenBank accession numbers.
tax_id
a character vector
tax_name
a character vector
isType
a logical vector indicating if the sequence is from a type strain.
These sequences were downloaded from the Ribosomal Database Project website http://rdp.cme.msu.edu/
data(seqdat) with(seqdat,{ table(tax_name, isType) })