GetIUPACSequence {atSNP} | R Documentation |
Convert the posotion weight matrix of a motif to the IUPAC sequence.
GetIUPACSequence(pwm, prob = 0.25)
pwm |
The position weight matrix, with the columns representing A, C, G, T. |
prob |
The probability threshold. Default: 0.25. |
A character string.
Sunyoung Shin sunyoung.shin@utdallas.edu, Chandler Zuo chandler.c.zuo@gmail.com
data(example) GetIUPACSequence(motif_library[[1]], prob = 0.2)