.UTR5Analysis {abseqR} | R Documentation |
Generates all the required plots for 5' UTR analysis. This includes upstream length distributions and upstream sequence validity.
.UTR5Analysis(utr5Directories, utr5Out, sampleNames, combinedNames, mashedNames, upstreamRanges, .save = TRUE)
utr5Directories |
list type. 5UTR directories where files are located |
utr5Out |
string type. Where to dump output |
sampleNames |
vector type. 1-1 with utr5Directories |
combinedNames |
string type. Title friendly string |
mashedNames |
string type. File name friendly string |
upstreamRanges |
list type. Upstream ranges for each sample. If length(utr5Directories) > 1, the plots will only be generated for upstream ranges that are present in ALL samples. (i.e the intersection) |
.save |
logical type, save Rdata? |
none