available_organisms {ViSEAGO} | R Documentation |
Display an interactive table with available organisms from a genomic ressource database (Bioconductor, EntrezGene, Ensembl, Uniprot).
available_organisms(object) ## S4 method for signature 'genomic_ressource' available_organisms(object)
object |
a |
an interactive datatable
.
javascript datatable
Yihui Xie (2016). DT: A Wrapper of the JavaScript Library 'DataTables'. R package version 0.2. https://CRAN.R-project.org/package=DT
Other genomic_ressource:
Bioconductor2GO()
,
Custom2GO()
,
Ensembl2GO()
,
EntrezGene2GO()
,
Uniprot2GO()
,
annotate()
,
genomic_ressource-class
,
taxonomy()
Other visualization:
GOclusters_heatmap()
,
GOcount()
,
GOterms_heatmap()
,
Upset()
,
overLapper()
,
show_heatmap()
,
show_table()
# display Bioconductor table Bioconductor<-ViSEAGO::Bioconductor2GO() ViSEAGO::available_organisms(Bioconductor) ## Not run: # display EntrezGene table EntrezGene<-ViSEAGO::EntrezGene2GO() ViSEAGO::available_organisms(EntrezGene) # display Ensembl table Ensembl<-ViSEAGO::Ensembl2GO() ViSEAGO::available_organisms(Ensembl) # display Uniprot table Uniprot<-ViSEAGO::Uniprot2GO() ViSEAGO::available_organisms(Uniprot) ## End(Not run)