prepareReferenceFasta {VarCon} | R Documentation |
This function imports Fasta file of the reference genome into R enviroment as DNAStringset.
prepareReferenceFasta(filepath)
filepath |
R conform filepath to the fasta file of the reference genome to use. |
Creates new DNAStringSet from the object stated by the entered filepath.
## Loading exemplary DNAStringSet filepath <- system.file("extdata", "fastaEx.fa", package="Biostrings") referenceDnaStringSet <- prepareReferenceFasta(filepath)