convertAnnotation {Structstrings} | R Documentation |
convertAnnotation
converts a type of dot bracket annotation into
another. This only works if the original bracket type is present and the
target bracket type is not.
convertAnnotation(x, from, to) ## S4 method for signature 'DotBracketString' convertAnnotation(x, from, to) ## S4 method for signature 'DotBracketStringSet' convertAnnotation(x, from, to) ## S4 method for signature 'DotBracketStringSetList' convertAnnotation(x, from, to)
x |
a |
from |
which annotation type should be converted? Must be one of the
following values: |
to |
Into which annotation type should the selected one be converted?
Must be one of the following values:
|
The modified input object, a DotBracketString*
object.
str <- "((.))..[[..]]...{{..}}......." dbs <- DotBracketString(str) convertAnnotation(dbs, 1L, 2L)