waterfallplot {SISPA} | R Documentation |
Given a sample changepoint data frame, will plot all samples zscores from that data.
waterfallplot(x)
x |
A data frame containing samples as rows followed by zscores and estimated sample_groups to be plotted. |
This function expects the output from cptSamples function of SISPA package, and highlights the sample profile of interest in the changepoint 1 with orange filled bars.
Bar plot pdf illustrating distinct SISPA sample profiles.
samples <- c("s1","s2","s3","s4","s5","s6","s7","s8","s9","s10") zscores <- c(3.83,2.70,2.67,2.31,1.70,1.25,-0.42,-1.01,-2.43,-3.37) changepoints <- c(1,1,1,2,2,3,3,NA,NA,NA) sample_groups <- c(1,1,1,0,0,0,0,0,0,0) my.data = data.frame(samples,zscores,changepoints,sample_groups) waterfallplot(my.data)