gene2roi {SCANVIS} | R Documentation |
Converts gene name/s to genomic coordinates using gene annotation file from SCANVISannotation
gene2roi(g,gen)
g |
vector of one or more gene names or gene ids in the same chromosome |
gen |
gene annotation object as output by SCANIVS.annotation |
This function is called upon by SCANVISlinkvar and SCANVISvisual
chr, start and end of the union of genomic intervals that overlap the genes in g
data(SCANVISexamples) g=c('TDRD6','PLA2G7') roi=gene2roi(g,gen19)