sc3_plot_cluster_stability {SC3}R Documentation

Plot stability of the clusters

Description

Stability index shows how stable each cluster is accross the selected range of ks. The stability index varies between 0 and 1, where 1 means that the same cluster appears in every solution for different k.

Usage

sc3_plot_cluster_stability.SingleCellExperiment(object, k)

## S4 method for signature 'SingleCellExperiment'
sc3_plot_cluster_stability(object, k)

Arguments

object

an object of 'SingleCellExperiment' class

k

number of clusters


[Package SC3 version 1.20.0 Index]