get.covg.thres,RnBDiffMeth-method {RnBeads} | R Documentation |
Gets the coverage threshold employed for obtaining statistics in the differential methylation tables
## S4 method for signature 'RnBDiffMeth' get.covg.thres(object)
object |
RnBDiffMeth object |
integer coverage threshold
Fabian Mueller
library(RnBeads.hg19) data(small.example.object) logger.start(fname=NA) dm <- rnb.execute.computeDiffMeth(rnb.set.example,pheno.cols=c("Sample_Group","Treatment")) get.covg.thres(dm)