assayDataAmp {R453Plus1Toolbox} | R Documentation |
Similar to assayData
of the Biobase ExpressionSet, this function returns the assay data of the amplicon slot of an instance of
the AVASet.
assayDataAmp(object)
object |
An |
The assay data of the amplicon slot consists of a list of two data frames with the number of forward and reverse reads of all amplicons for each
sample (see AVASet-class
for details).
Christoph Bartenhagen
fDataAmp
, featureDataAmp
, AVASet-class
# load an AVA dataset containing 6 samples, 4 amplicons and 259 variants data(avaSetExample) # show contents of amplicon assay data assayDataAmp(avaSetExample)